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Schema
Citing CMDGA
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Assay category
7
3D chromatin structure
Assay
114
DNase-seq
91
ChIP-seq
76
ATAC-seq
66
total RNA-seq
65
single cell RNA-seq
9
RRBS
7
Hi-C
7
snATAC-seq
3
pCHi-C
3
small RNA-seq
3
snDrop-seq
2
RNA microarray
2
STARR-seq
1
FAIRE-seq
1
WGBS
Project
7
AMP
RFA
6
AMP
1
AMP2
Experiment status
7
released
Genome assembly (visualization)
3
hg19
Organism
7
Homo sapiens
Biosample type
7
tissue
Organ
9
pancreas
8
epithelium
6
musculature of body
5
blood vessel
5
vasculature
4
limb
4
liver
3
brain
3
heart
2
vein
1
connective tissue
1
kidney
Life stage
6
adult
1
child
Available data
3
hic
2
bedpe bed3+
Library made from
7
DNA
Date released
4
July, 2019
2
March, 2020
1
August, 2021
Lab
6
AMP-T2D consortium
1
Katalin Susztak, Upenn
Replication type
7
unreplicated
Showing 7 of 7 results
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Experiment
DSR145PQU
released
Hi-C
of kidney
Homo sapiens
kidney female adult (63 years)
Lab:
Katalin Susztak, Upenn
Project:
AMP
Experiment
DSR492BLD
released
Hi-C
of psoas muscle
Homo sapiens
psoas muscle male adult (34 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR656CHU
released
Hi-C
of psoas muscle
Homo sapiens
psoas muscle male child (3 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR998CGE
released
Hi-C
of gastrocnemius medialis
Homo sapiens
gastrocnemius medialis male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR851SPB
released
Hi-C
of gastrocnemius medialis
Homo sapiens
gastrocnemius medialis female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR920BPY
released
Hi-C
of gastrocnemius medialis
Homo sapiens
gastrocnemius medialis female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR163ZFS
released
Hi-C
of gastrocnemius medialis
Homo sapiens
gastrocnemius medialis male adult (37 years)
Lab:
AMP-T2D consortium
Project:
AMP