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Schema
Citing CMDGA
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Assay category
8
DNA methylation
Assay
420
total RNA-seq
282
ChIP-seq
165
ATAC-seq
78
single cell RNA-seq
51
WGBS
27
DNase-seq
13
Hi-C
11
snATAC-seq
10
MeRIP-seq
8
RRBS
3
FAIRE-seq
2
Capture-C
2
small RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
RNA microarray
1
pCHi-C
Project
8
AMP
RFA
8
AMP
Experiment status
8
released
Genome assembly (visualization)
8
hg19
Organism
8
Homo sapiens
Biosample type
6
primary cell
2
tissue
Organ
6
epithelium
5
musculature of body
4
kidney
2
brain
2
heart
2
liver
2
pancreas
1
connective tissue
1
eye
1
pericardium
1
vasculature
Life stage
7
unknown
1
adult
Available data
8
bed bedMethyl
8
bigBed bedMethyl
Library made from
8
DNA
Date released
8
July, 2019
Lab
8
AMP-T2D consortium
Replication type
8
isogenic
Audit category:
1
inconsistent ontology term
Showing 8 of 8 results
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Experiment
DSR691GRN
released
RRBS
of renal cortical epithelial cell
Homo sapiens
renal cortical epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR567VXL
released
RRBS
of kidney epithelial cell
Homo sapiens
kidney epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR633GTR
released
RRBS
of retinal pigment epithelial cell
Homo sapiens
retinal pigment epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR438ASZ
released
RRBS
of choroid plexus epithelial cell
Homo sapiens
choroid plexus epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR210DNG
released
RRBS
of islet of Langerhans
Homo sapiens
islet of Langerhans male (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR682FAB
released
Audit error
1
RRBS
of epithelial cell of proximal tubule
Homo sapiens
epithelial cell of proximal tubule
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR015YSF
released
RRBS
of pancreas
Homo sapiens
pancreas male adult (71 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR467ULV
released
RRBS
of hepatocyte
Homo sapiens
hepatocyte
Lab:
AMP-T2D consortium
Project:
AMP