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Citing CMDGA
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Assay category
3
DNA binding
2
DNA accessibility
1
Transcription
Assay
3
ChIP-seq
2
snATAC-seq
1
total RNA-seq
Project
4
AMP
2
T1D
RFA
4
AMP
2
T1D
Experiment status
6
released
Organism
5
Homo sapiens
Target of assay
3
control
Biosample type
6
tissue
Organ
6
pancreas
Life stage
2
adult
2
child
1
embryonic
Available data
19
bam
17
fastq
bigWig
14
bed narrowPeak
14
bigBed narrowPeak
8
bed broadPeak
7
tagAlign
2
bed bed3+
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
Platform
2
Illumina HiSeq 2000
1
Illumina Genome Analyzer
Run type
3
single-ended
Read length (nt)
2
36
1
51
Mapped read length (nt)
1
51
Library made from
4
DNA
1
RNA
Date released
2
August, 2017
2
January, 2021
1
May, 2021
1
October, 2018
Lab
3
AMP-T2D consortium
3
Kyle Gaulton, UCSD
Replication type
6
unreplicated
3
isogenic
2
anisogenic
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bigWig
Showing 6 of 6 results
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Experiment
DSR306MQC
released
total RNA-seq
of pancreas
Homo sapiens
pancreas embryo (54-58 days)
Lab:
Kyle Gaulton, UCSD
Project:
AMP
Experiment
DSR346BYL
released
snATAC-seq
of pancreas
Homo sapiens
pancreas male child (9 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR498EST
released
snATAC-seq
of pancreas
Homo sapiens
pancreas male child (14 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
TSTSR824SDJ
released
ChIP-seq
of pancreas
Homo sapiens
pancreas adult (60 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR203642
released
ChIP-seq
of pancreas
Homo sapiens
pancreas female adult (30 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR850449
released
ChIP-seq
of pancreas
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP