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Citing CMDGA
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Assay category
7
DNA accessibility
Assay
403
total RNA-seq
205
ChIP-seq
149
ATAC-seq
74
single cell RNA-seq
51
WGBS
11
snATAC-seq
10
MeRIP-seq
8
Hi-C
7
DNase-seq
2
Capture-C
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
pCHi-C
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
7
GRCh38
5
hg19
Organism
7
Homo sapiens
Biosample type
7
tissue
Organ
78
kidney
33
musculature of body
32
brain
32
limb
30
heart
18
ureter
14
epithelium
9
connective tissue
7
pancreas
7
vasculature
6
liver
5
blood vessel
4
eye
2
adipose tissue
2
artery
1
spleen
Life stage
6
adult
1
unknown
Available data
7
bam
7
bed narrowPeak
7
bigBed narrowPeak
7
bigWig
6
bed bed3+
6
bed broadPeak
6
bigBed broadPeak
3
fastq
Platform
2
Illumina HiSeq 4000
1
Illumina Genome Analyzer
1
Illumina NextSeq 500
Run type
2
paired-ended
1
single-ended
Read length (nt)
2
36
1
20
Library made from
7
DNA
Date released
4
June, 2019
2
November, 2018
1
August, 2017
October, 2019
Lab
7
AMP-T2D consortium
Replication type
6
unreplicated
1
anisogenic
month_released!
October, 2019
Showing 7 of 7 results
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Experiment
DSR653JBP
released
DNase-seq
of body of pancreas
Homo sapiens
body of pancreas male adult (37 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR112RFK
released
DNase-seq
of body of pancreas
Homo sapiens
body of pancreas male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR367AIT
released
DNase-seq
of pancreas
Homo sapiens
pancreas female adult (30 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR018MFK
released
DNase-seq
of pancreas
Homo sapiens
pancreas male adult (34 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR501DXR
released
DNase-seq
of body of pancreas
Homo sapiens
body of pancreas female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR195PGP
released
DNase-seq
of body of pancreas
Homo sapiens
body of pancreas female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR171380
released
DNase-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Lab:
AMP-T2D consortium
Project:
AMP