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Citing CMDGA
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Assay category
16
DNA binding
7
DNA accessibility
3
DNA methylation
2
Transcription
1
3D chromatin structure
Assay
4
snATAC-seq
2
DNase-seq
1
FAIRE-seq
Project
4
T1D
3
AMP
RFA
4
T1D
3
AMP
Experiment status
7
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
7
Homo sapiens
Biosample type
7
tissue
Organ
7
pancreas
Life stage
5
adult
2
child
Available data
3
bam
3
bed narrowPeak
3
bigBed narrowPeak
3
bigWig
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
fastq
Platform
1
Illumina Genome Analyzer I
Run type
1
single-ended
Read length (nt)
1
50
Library made from
7
DNA
Date released
4
January, 2021
2
June, 2019
1
November, 2018
Lab
4
Kyle Gaulton, UCSD
3
AMP-T2D consortium
Replication type
4
unreplicated
2
isogenic
1
anisogenic
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Showing 7 of 7 results
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Experiment
DSR346BYL
released
snATAC-seq
of pancreas
Homo sapiens
pancreas male child (9 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR438WOP
released
snATAC-seq
of pancreas
Homo sapiens
pancreas male adult (33 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR154TPS
released
snATAC-seq
of pancreas
Homo sapiens
pancreas female adult (33 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR498EST
released
snATAC-seq
of pancreas
Homo sapiens
pancreas male child (14 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR367AIT
released
DNase-seq
of pancreas
Homo sapiens
pancreas female adult (30 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR018MFK
released
DNase-seq
of pancreas
Homo sapiens
pancreas male adult (34 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR803CTG
released
FAIRE-seq
of pancreas
Homo sapiens
pancreas adult (54 years) and adult (60 years)
Lab:
AMP-T2D consortium
Project:
AMP