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Citing CMDGA
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Assay category
2
DNA binding
1
DNA accessibility
Assay
2
ChIP-seq
1
FAIRE-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Target of assay
3
transcription factor
RNA binding protein
Biosample type
2
cell line
1
primary cell
Organ
2
liver
1
blood vessel
1
epithelium
1
vasculature
1
vein
Life stage
2
child
1
newborn
Available data
3289
bam
3028
bigWig
1677
bed narrowPeak
1600
tsv
1269
fastq
949
bigBed narrowPeak
398
tagAlign
313
bed broadPeak
276
bigBed broadPeak
271
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Platform
2
Illumina Genome Analyzer
Run type
2
single-ended
Read length (nt)
2
35
Library made from
3
DNA
Date released
2
November, 2017
1
October, 2019
Lab
3
AMP-T2D consortium
Replication type
3
isogenic
target.investigated_as!
RNA binding protein
Showing 3 of 3 results
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Experiment
DSR024UHG
released
FAIRE-seq
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein newborn
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR665514
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
MYC
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR978069
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
POLR2A
Lab:
AMP-T2D consortium
Project:
AMP