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Schema
Citing CMDGA
Clear Filters
Assay category
3
3D chromatin structure
Assay
242
ChIP-seq
28
total RNA-seq
18
ATAC-seq
10
DNase-seq
4
pCHi-C
3
Hi-C
1
FAIRE-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
in vitro differentiated cells
1
cell line
1
primary cell
1
tissue
Organ
1
blood vessel
1
epithelium
1
heart
1
pancreas
1
vasculature
1
vein
Life stage
1
adult
1
embryonic
1
unknown
Available data
2
hic
1
bed bed3+
1
bedpe bed3+
1
bigWig
1
hdf5
Library made from
3
DNA
Date released
8
July, 2019
8
March, 2020
3
August, 2021
3
October, 2019
3
October, 2022
2
November, 2019
1
December, 2018
1
March, 2019
1
March, 2023
Lab
3
AMP-T2D consortium
Replication type
1
anisogenic
1
isogenic
1
unreplicated
Audit category:
1
audit script error
Audit category:
1
inconsistent assembly
target.investigated_as!
chromatin remodeller
biosample_type!
in vitro differentiated cells
Showing 3 of 3 results
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Experiment
DSR786VPZ
released
Hi-C
of heart
Homo sapiens
heart embryo (57 days) and embryo (67 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR617LKP
released
Audit warning
1
Hi-C
of Panc1
Homo sapiens
Panc1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR251SCT
released
Audit error
1
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP