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Assay category
3
Transcription
1
DNA binding
Assay
3
total RNA-seq
1
ChIP-seq
1
pCHi-C
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
5
Homo sapiens
Target of assay
histone
2
histone modification
1
broad histone mark
1
control
1
narrow histone mark
Biosample type
4
in vitro differentiated cells
1
primary cell
Life stage
4
embryonic
1
unknown
Available data
4
bam
4
tsv
3
bigWig
3
fastq
Platform
2
Illumina Genome Analyzer IIx
2
Illumina HiSeq 2000
Run type
3
single-ended
Read length (nt)
2
100
1
36
1
101
Library insert size (nt)
2
225-275
Library made from
3
RNA
2
DNA
Date released
3
February, 2018
1
March, 2020
1
May, 2021
Lab
27
Kyle Gaulton, UCSD
5
AMP-T2D consortium
1
Struan F.A. Grant, CHOP
Replication type
3
unreplicated
2
anisogenic
target.investigated_as!
histone
Showing 5 of 5 results
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Experiment
DSR213JXG
released
total RNA-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell embryo (0 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR062TSX
released
pCHi-C
of embryonic stem cell
Homo sapiens
embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR787281
released
total RNA-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR358715
released
total RNA-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR909874
released
ChIP-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP