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Citing CMDGA
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Assay category
1
3D chromatin structure
Assay
628
ChIP-seq
243
total RNA-seq
128
single cell RNA-seq
61
ATAC-seq
27
snATAC-seq
17
WGBS
12
DNase-seq
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
1
pCHi-C
Project
1
AMP
RFA
1
AMP
Experiment status
1
released
Organism
1
Homo sapiens
Biosample type
1
cell line
Organ
1
liver
Life stage
1
child
Available data
23
hic
20
bedpe bed3+
5
bed bed3+
5
bigWig
5
hdf5
3
cool
1
bedpe
1
fastq
Platform
1
Illumina HiSeq 2000
Run type
1
paired-ended
Read length (nt)
1
50
Library made from
1
DNA
Date released
1
December, 2018
Lab
1
AMP-T2D consortium
Replication type
1
isogenic
target.investigated_as!
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Experiment
TSTSR542TGF
released
Hi-C
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP