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Assay category
4
DNA binding
2
Transcription
Assay
4
ChIP-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
4
Homo sapiens
Target of assay
4
histone
histone modification
2
broad histone mark
2
control
2
narrow histone mark
2
transcription factor
Biosample type
4
in vitro differentiated cells
Life stage
3
unknown
1
embryonic
Available data
4
bam
4
fastq
2
bed narrowPeak
2
bigWig
1
bed bed3+
Platform
3
Illumina HiSeq 2500
1
Illumina Genome Analyzer IIx
Run type
4
single-ended
Read length (nt)
3
36
1
50
Library made from
4
DNA
Date released
3
December, 2017
1
February, 2018
Lab
4
AMP-T2D consortium
Replication type
3
unreplicated
1
isogenic
Audit category:
1
inconsistent control read length
target.investigated_as!
histone modification
Showing 4 of 4 results
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Experiment
TSTSR282245
released
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR102106
released
Audit warning
1
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
FOXA2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR043278
released
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
FOXA1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR543637
released
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP