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Assay category
1
3D chromatin structure
1
DNA accessibility
Assay
1
ATAC-seq
1
Hi-C
Project
2
AMP
RFA
1
AMP
1
AMP2
Experiment status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
cell line
Organ
2
liver
Life stage
1
adult
1
unknown
Available data
360
fastq
359
bam
323
bigWig
300
bed narrowPeak
287
bigBed narrowPeak
52
bed broadPeak
52
bigBed broadPeak
15
tsv
7
tagAlign
3
tar
1
bed bed3
1
bed bed3+
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
1
vcf
Library made from
2
DNA
Date released
1
August, 2021
1
February, 2021
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
Replication type
1
isogenic
1
unreplicated
Audit category:
1
inconsistent replicate
target.investigated_as!
narrow histone mark
Showing 2 of 2 results
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Experiment
DSR744JJN
released
Hi-C
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR057RCG
released
Audit error
1
ATAC-seq
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP