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Assay
962
ChIP-seq
403
total RNA-seq
167
DNase-seq
161
ATAC-seq
148
single cell RNA-seq
49
pCHi-C
21
snATAC-seq
13
Hi-C
13
WGBS
11
RRBS
10
small RNA-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
MeRIP-seq
3
RNA microarray
2
FAIRE-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Organism
3
Homo sapiens
Target of assay
3
control
nucleotide modification
Biosample type
3
cell line
Organ
3
epithelium
3
pancreas
Life stage
3
unknown
adult
Library made from
3
RNA
Date released
3
November, 2020
Lab
3
Rohit N. Kulkarni, M.D., Ph.D.
Replication type
3
isogenic
Audit category:
3
inconsistent ontology term
target.investigated_as!
nucleotide modification
replicates.library.biosample.life_stage!
adult
Showing 3 of 3 results
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Experiment
DSR885XWK
released
Audit error
1
MeRIP-seq
of EndoC_BH1
Homo sapiens
EndoC_BH1
Target:
Control
Lab:
Rohit N. Kulkarni, M.D., Ph.D.
Project:
AMP
Experiment
DSR251XSB
released
Audit error
1
MeRIP-seq
of EndoC_BH1
Homo sapiens
EndoC_BH1
Target:
Control
Lab:
Rohit N. Kulkarni, M.D., Ph.D.
Project:
AMP
Experiment
DSR282KWU
released
Audit error
1
MeRIP-seq
of EndoC_BH1
Homo sapiens
EndoC_BH1
Target:
Control
Lab:
Rohit N. Kulkarni, M.D., Ph.D.
Project:
AMP