Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
2
Transcription
1
DNA binding
Assay
4
pCHi-C
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
ChIP-seq
Project
5
AMP
2
community
RFA
5
AMP
2
community
Experiment status
7
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
5
Homo sapiens
Target of assay
1
control
Biosample type
1003
tissue
475
primary cell
137
cell line
135
in vitro differentiated cells
7
stem cell
Organ
1
connective tissue
Life stage
5
unknown
Available data
4
fastq
4
tsv
3
bam
3
bed bed3+
bigWig
2
bed narrowPeak
Platform
1
Illumina HiSeq 2500
Run type
1
single-ended
Read length (nt)
1
36
Library made from
5
DNA
Date released
4
March, 2020
2
March, 2023
1
December, 2017
Lab
5
AMP-T2D consortium
2
Anna Gloyn, Oxford
Replication type
5
unreplicated
1
anisogenic
1
isogenic
Audit category:
1
inconsistent ontology term
target.investigated_as!
nucleotide modification
files.file_type!
bigWig
Showing 7 of 7 results
table-tab-icon
matrix-icon
Download
Experiment
DSR694EST
released
CRISPR RNA-seq
of SB Ad3.1
Lab:
Anna Gloyn, Oxford
Project:
community
Experiment
DSR904DAB
released
CRISPRi RNA-seq
of SB Ad3.1
Lab:
Anna Gloyn, Oxford
Project:
community
Experiment
DSR159GRR
released
pCHi-C
of trophoblast
Homo sapiens
trophoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR055YXC
released
pCHi-C
of neural progenitor cell (neural stem cell)
Homo sapiens
neural progenitor cell (neural stem cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR881MKA
released
Audit error
1
pCHi-C
of mesenchymal stem cell
Homo sapiens
mesenchymal stem cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR543FXV
released
pCHi-C
of mesendoderm
Homo sapiens
mesendoderm
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR481230
released
ChIP-seq
of hESC
Homo sapiens
hESC (embryoid body cell)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP