Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
5
3D chromatin structure
2
DNA methylation
Assay
91
ChIP-seq
61
total RNA-seq
46
ATAC-seq
9
DNase-seq
6
single cell RNA-seq
5
Hi-C
2
WGBS
1
FAIRE-seq
1
pCHi-C
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
7
Homo sapiens
Biosample type
4
primary cell
3
tissue
Organ
60
pancreas
55
epithelium
11
heart
9
liver
7
blood vessel
7
connective tissue
7
musculature of body
7
vasculature
6
adipose tissue
5
limb
3
brain
2
spleen
2
vein
1
kidney
Life stage
4
unknown
3
adult
Available data
3
bigWig
3
hic
2
bam
2
bed bed3+
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
Library made from
7
DNA
Date released
4
July, 2019
2
March, 2020
1
October, 2019
Lab
7
AMP-T2D consortium
Replication type
4
unreplicated
2
isogenic
1
anisogenic
Audit category:
1
audit script error
target.investigated_as!
transcription factor
Showing 7 of 7 results
table-tab-icon
matrix-icon
Download
Experiment
DSR073ZJB
released
Hi-C
of aorta
Homo sapiens
aorta female adult (30 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR430XOJ
released
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR251SCT
released
Audit error
1
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR933OWU
released
Hi-C
of endothelial cell of hepatic sinusoid
Homo sapiens
endothelial cell of hepatic sinusoid
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR240JNB
released
Hi-C
of brain microvascular endothelial cell
Homo sapiens
brain microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR457FLZ
released
WGBS
of aorta
Homo sapiens
aorta female adult (30 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR622RXD
released
WGBS
of aorta
Homo sapiens
aorta male adult (34 years)
Lab:
AMP-T2D consortium
Project:
AMP