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Citing CMDGA
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Assay category
3
DNA binding
Assay
3
ChIP-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Target of assay
199
histone modification
198
histone
109
broad histone mark
88
narrow histone mark
50
control
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
Biosample type
2
in vitro differentiated cells
1
primary cell
Organ
2
connective tissue
Life stage
3
unknown
Available data
3
bam
3
bed narrowPeak
3
bigWig
3
fastq
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Platform
2
HiSeq 1500
1
Illumina Genome Analyzer
Run type
3
single-ended
Read length (nt)
2
70
1
36
Library made from
3
DNA
Date released
15
November, 2017
7
November, 2018
6
January, 2019
3
August, 2017
3
December, 2017
2
December, 2018
Lab
3
AMP-T2D consortium
Replication type
2
unreplicated
1
isogenic
Audit category:
2
inconsistent control read length
Showing 3 of 3 results
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Experiment
TSTSR105625
released
Audit warning
1
ChIP-seq
of adipocyte
Homo sapiens
adipocyte
Target:
BRD4
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR400538
released
Audit warning
1
ChIP-seq
of adipocyte
Homo sapiens
adipocyte
Target:
BRD4
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR204469
released
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
EZH2
Lab:
AMP-T2D consortium
Project:
AMP