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Citing CMDGA
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Assay category
4
DNA binding
Assay
4
ChIP-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
4
Homo sapiens
Target of assay
4
histone
4
histone modification
3
narrow histone mark
3
transcription factor
2
control
1
broad histone mark
Biosample type
4
in vitro differentiated cells
Organ
4
embryo
Life stage
4
unknown
Available data
4
bam
4
fastq
3
bed narrowPeak
3
bigWig
2
bed bed3+
Platform
4
Illumina HiSeq 2500
Run type
4
single-ended
Read length (nt)
4
36
1
50
Library made from
4
DNA
Date released
6
February, 2018
4
December, 2017
Lab
4
AMP-T2D consortium
Replication type
2
isogenic
2
unreplicated
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
Showing 4 of 4 results
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Experiment
TSTSR522624
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR020690
released
Audit not_compliant
1
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR642129
released
Audit warning
1
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
H3K4me1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR290464
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP