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Citing CMDGA
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Assay category
7
DNA binding
Assay
7
ChIP-seq
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
7
GRCh38
7
hg19
Organism
7
Homo sapiens
Target of assay
13
histone
13
histone modification
12
transcription factor
7
control
7
narrow histone mark
6
broad histone mark
Biosample type
4
in vitro differentiated cells
2
primary cell
1
stem cell
Organ
pancreas
2
epithelium
2
liver
1
embryo
Life stage
7
unknown
Available data
371
bigWig
370
bed narrowPeak
338
bam
167
tagAlign
130
bigBed narrowPeak
62
fastq
25
bed broadPeak
14
bigBed broadPeak
7
bed bed3+
1
tagAlign bed3+
Platform
5
Illumina HiSeq 2500
Run type
5
single-ended
Read length (nt)
4
36
1
50
Library made from
7
DNA
Date released
5
December, 2017
2
August, 2021
Lab
7
AMP-T2D consortium
Replication type
5
isogenic
2
anisogenic
Audit category:
1
inconsistent control read length
organ_slims!
pancreas
Showing 7 of 7 results
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Experiment
DSR880DJJ
released
ChIP-seq
of hepatocyte
Homo sapiens
hepatocyte
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR287SFB
released
ChIP-seq
of hepatocyte
Homo sapiens
hepatocyte
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR290464
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR186936
released
ChIP-seq
of Posterior foregut
Homo sapiens
Posterior foregut
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR666026
released
ChIP-seq
of primitive gut cell
Homo sapiens
primitive gut cell
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR568152
released
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR015572
released
Audit warning
1
ChIP-seq
of hESC
Homo sapiens
hESC (embryoid body cell)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP