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Schema
Citing CMDGA
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Assay category
2
DNA binding
Assay
2
ChIP-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Target of assay
43
histone
43
histone modification
23
narrow histone mark
20
broad histone mark
9
transcription factor
2
RNA binding protein
1
control
0
other post-translational modification
Biosample type
2
tissue
Organ
2
pancreas
Life stage
1
adult
1
unknown
Available data
2
bam
2
bigWig
2
fastq
1
bed bed3+
1
bed narrowPeak
1
bigBed narrowPeak
Platform
1
Illumina Genome Analyzer
1
Illumina Genome Analyzer IIx
Run type
2
single-ended
Read length (nt)
32
40
24
36
18
100
15
76
3
25
2
51
2
75
1
27
1
35
1
50
1
101
Mapped read length (nt)
1
51
Library made from
2
DNA
Date released
1
August, 2017
1
October, 2018
Lab
2
AMP-T2D consortium
Replication type
2
anisogenic
Audit category:
1
missing controlled_by
Showing 2 of 2 results
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Experiment
TSTSR141NSK
released
ChIP-seq
of pancreas
Homo sapiens
pancreas adult (54 years) and adult (60 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR774103
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (38 years) and male (62 years) and male (63 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP