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Citing CMDGA
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Assay category
4
DNA binding
Assay
4
ChIP-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Target of assay
42
transcription factor
31
histone
31
histone modification
21
control
16
narrow histone mark
15
broad histone mark
4
RNA binding protein
3
chromatin remodeller
0
other post-translational modification
Biosample type
2
in vitro differentiated cells
2
tissue
Organ
4
liver
2
epithelium
Life stage
2
adult
2
embryonic
1
child
Available data
4
bam
4
bed narrowPeak
4
bigBed narrowPeak
4
bigWig
4
fastq
Platform
2
Illumina HiSeq 2500
1
Illumina Genome Analyzer IIx
1
Illumina HiSeq 4000
Run type
3
single-ended
1
paired-ended
Read length (nt)
2
76
1
36
1
100
Library made from
4
DNA
Date released
39
November, 2017
24
November, 2018
11
October, 2018
8
August, 2017
6
January, 2019
5
May, 2019
5
May, 2021
4
April, 2019
4
December, 2017
4
June, 2019
2
December, 2018
1
August, 2021
1
November, 2019
Lab
4
AMP-T2D consortium
Replication type
2
isogenic
1
anisogenic
1
unreplicated
Showing 4 of 4 results
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Experiment
TSTSR845431
released
ChIP-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR296175
released
ChIP-seq
of liver
Homo sapiens
liver female child (6 years) and male adult (32 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR113935
released
ChIP-seq
of hepatocyte
Homo sapiens
hepatocyte
Target:
EZH2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR967925
released
ChIP-seq
of hepatocyte
Homo sapiens
hepatocyte
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP