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Schema
Citing CMDGA
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Assay category
2
DNA binding
Assay
2
ChIP-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Target of assay
13
histone
13
histone modification
8
narrow histone mark
5
broad histone mark
2
RNA binding protein
2
transcription factor
1
control
Biosample type
1
cell line
1
primary cell
Organ
1
liver
Life stage
1
child
1
unknown
Available data
2
bam
2
bed broadPeak
2
bed narrowPeak
2
bigBed broadPeak
2
bigBed narrowPeak
2
bigWig
2
fastq
Platform
229
Illumina HiSeq 2000
58
Illumina HiSeq 2500
56
Illumina HiSeq 4000
52
Illumina Genome Analyzer
52
Illumina Genome Analyzer IIx
8
Illumina Genome Analyzer II
6
HiSeq 1500
2
Illumina Genome Analyzer IIe
1
Applied Biosystems SOLiD System 3 Plus
1
MiSeq
Run type
2
single-ended
Read length (nt)
2
36
Library made from
2
DNA
Date released
1
August, 2017
1
November, 2017
Lab
2
AMP-T2D consortium
Replication type
2
isogenic
Audit category:
1
inconsistent control read length
Showing 2 of 2 results
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Experiment
TSTSR310667
released
Audit warning
1
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR132965
released
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP