Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema
    • Citing CMDGA
Clear Filters
Assay
  • 9ChIP-seq
  • 7ATAC-seq
  • 7RNA-seq
  • 4Mint-ChIP-seq
  • 3DNase-seq
  • 2single cell isolation followed by RNA-seq
  • 1whole genome sequencing assay
Pipeline status
  • 7active
Pipeline groups
  • 1ATAC-seq Pipeline (ENCODE replicated)
  • 1ATAC-seq Pipeline (ENCODE unreplicated)
  • 1ATAC-seq Pipeline Cebola Lab
  • 1ATAC-seq Pipeline Cebola Lab (Hepatocytes)
  • 1ATAC-seq Pipeline Gaulton Lab
  • 1ATAC-seq Pipeline PLoS Genet. 2021-05-13;17(5):e100953
  • 1Activity by Contact
Developed by
  • 3AMP-T2D consortium
  • 2Ines Cebola, Imperial College London
  • 2Kyle Gaulton, UCSD

Showing 7 of 7 results

table-tab-iconmatrix-icon

  • Pipeline

    DPL961ZQY

    active

    ATAC-seq Pipeline PLoS Genet. 2021-05-13;17(5):e100953
    Assays: ATAC-seq
    Software:
  • Pipeline

    DPL707AXE

    active

    ATAC-seq Pipeline (ENCODE replicated)
    Assays: ATAC-seq
    Software:
  • Pipeline

    DPL121OYY

    active

    ATAC-seq Pipeline Gaulton Lab
    Assays: ATAC-seq
    Software:
  • Pipeline

    DPL779IGH

    active

    ATAC-seq Pipeline Cebola Lab (Hepatocytes)
    Assays: ATAC-seq
    Software:
  • Pipeline

    DPL741HGX

    active

    ATAC-seq Pipeline Cebola Lab
    Assays: ATAC-seq
    Software:
  • Pipeline

    DPL010CNP

    active

    Activity by Contact
    Assays: ATAC-seq, ChIP-seq, DNase-seq
    Software:
  • Pipeline

    DPL967MZM

    active

    ATAC-seq Pipeline (ENCODE unreplicated)
    Assays: ATAC-seq
    Software:
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2023 Regents of the University of California.

  • UC San Diego