Search – Common Metabolic Diseases Genome Atlas

Showing 12 of 12 results

Publication
released
Dynamic chromatin organization and regulatory interactions in human endothelial cell differentiation
Kris G Alavattam, Katie A Mitzelfelt, Giancarlo Bonora, et al.
Stem Cell Reports. 2023-01-10;18(1):159-174.
Available supplemental data: website
URL: https://data.4dnucleome.org/Alavattam-Mitzelfelt-endothelial-differentiation-chromatin
Data summary: Data have been deposited in the 4DN data portal and are publicly available at…
Available supplemental data: website
Data summary: Previously published CM differentiation data are available from GEO: GSE106690 (Bertero et al.,…
Available supplemental data: website
URL: https://github.com/Noble-Lab/
Data summary: Source code for analyses performed in this study is available at…
Publication
released
Multiomic Profiling Identifies cis-Regulatory Networks Underlying Human Pancreatic β Cell Identity and Function
Nathan Lawlor, Eladio J. Márquez, Peter Orchard, et al.
Cell Reports. 2019-01-15;26(3):788-801.e6.
- doi:10.1016/j.celrep.2018.12.083
- PMID:30650367
URL: https://www.sciencedirect.com/science/article/pii/S2211124718320436?via%3Dihub
Publication
released
The TFAP2C-Regulated OCT4 Naive Enhancer Is Involved in Human Germline Formation
Di Chen, Wanlu Liu, Jill Zimmerman, et al.
Cell Reports. 2018-12-26;25(13):3591-3602.e5.
- doi:10.1016/j.celrep.2018.12.011
- PMID:30590035
URL: https://www.sciencedirect.com/science/article/pii/S2211124718319223?via%3Dihub
Publication
released
Single-Cell Transcriptome Profiling of Mouse and hESC-Derived Pancreatic Progenitors
Nicole A J Krentz, Michelle Y Y Lee, Eric E Xu, et al.
Stem Cell Reports. 2018-12-11;11(6):1551-1564.
Publication
released
Genes Associated with Pancreas Development and Function Maintain Open Chromatin in iPSCs Generated from Human Pancreatic Beta Cells
Matthias Thurner, Liraz Shenhav, Agata Wesolowska-Andersen, et al.
Stem Cell Reports. 2017-11-14;9(5):1395-1405.
- doi:10.1016/j.stemcr.2017.09.020
- PMID:29107594
URL: https://www.sciencedirect.com/science/article/pii/S2213671117304277
Publication
released
iPSCORE: A Resource of 222 iPSC Lines Enabling Functional Characterization of Genetic Variation across a Variety of Cell Types
Athanasia D Panopoulos, Matteo D'Antonio, Paola Benaglio, et al.
Stem Cell Reports. 2017-04-11;8(4):1086-1100.
Publication
released
Single-cell Transcriptomes Identify Human Islet Cell Signatures And Reveal Cell-type–specific Expression Changes In Type 2 Diabetes
Nathan Lawlor, Joshy George, Mohan Bolisetty, et al.
Genome Research. 2017-02-01;27(2):208-222.
- doi:10.1101/gr.212720.116
- PMID:27864352
Publication
released
A Compendium of Chromatin Contact Maps Reveals Spatially Active Regions in the Human Genome
Anthony D. Schmitt, Ming Hu, Inkyung Jung, et al.
Cell Reports. 2016-11-15;17(8):2042-2059.
- doi:10.1016/j.celrep.2016.10.061
- PMID:27851967
URL: https://www.cell.com/cell-reports/fulltext/S2211-1247(16)31481-4
Publication
released
Prepatterning Of Differentiation-driven Nuclear Lamin A/C-associated Chromatin Domains By GlcNAcylated Histone H2B
Torunn Rønningen, Akshay Shah, Anja R. Oldenburg, et al.
Genome Research. 2015-12;25(12):1825-1835.
- doi:10.1101/gr.193748.115
- PMID:26359231
Publication
released
Acute TNF-induced Repression Of Cell Identity Genes Is Mediated By NFκB-directed Redistribution Of Cofactors From Super-enhancers
Søren Fisker Schmidt, Bjørk Ditlev Larsen, Anne Loft, et al.
Genome Research. 2015-09;25(9):1281-1294.
- doi:10.1101/gr.188300.114
- PMID:26113076
Publication
released
Large-Scale Identification of Coregulated Enhancer Networks in the Adult Human Brain
Marit W. Vermunt, Peter Reinink, Jeroen Korving, et al.
Cell Reports. 2014-10-23;9(2):767-779.
- doi:10.1016/j.celrep.2014.09.023
- PMID:25373911
URL: https://www.sciencedirect.com/science/article/pii/S221112471400802X?via%3Dihub
Publication
released
Genome-wide Analysis Of Histone Modifications In Human Pancreatic Islets
Reena Bhandare, Jonathan Schug, John Le Lay, et al.
Genome Research. 2010-04;20(4):428-433.
- doi:10.1101/gr.102038.109
- PMID:20181961