Showing 7 of 7 results

• Publication

  released

  Primary osteoarthritis chondrocyte map of chromatin conformation reveals novel candidate effector genes

  Norbert Bittner, Chenfu Shi, Danyun Zhao, et al.

  Ann Rheum Dis. 2024-03-13;:ard-2023-224945.

  • PMID:38479789
  • doi:10.1136/ard-2023-224945

• Publication

  released

  The Tabula Sapiens: A multiple-organ, single-cell transcriptomic atlas of humans

  Tabula Sapiens Consortium*; Robert C Jones, Jim Karkanias, Mark A Krasnow, et al.

  Science. 2022-05-13;376(6594):eabl4896.

  • doi:10.1126/science.abl4896
  • PMID:35549404

  Available supplemental data: website

  URL: http://tabula-sapiens-portal.ds.czbiohub.org/

  Data summary: The entire dataset can be explored interactively at http://tabula-sapiens-portal.ds.czbiohub.org/.

  Available supplemental data: website

  URL: https://doi.org/10.5281/zenodo.6069683

  Data summary: The code used for the analysis is available from Zenodo (https://doi.org/10.5281/zenodo.6069683).

  Available supplemental data: website

  URL: https://doi.org/10.6084/m9.figshare.14267219

  Data summary: Gene counts and metadata are available from figshare…See more

  Available supplemental data: website

  URL: https://registry.opendata.aws/tabula-sapiens/

  Data summary: The raw data files are available from a public AWS S3 bucket…See more

  Available supplemental data: website

  URL: https://doi.org/10.6084/m9.figshare.14962947

  Data summary: The histology images are available from figshare (https://doi.org/10.6084/m9.figshare.14962947).

  Available supplemental data: website

  URL: https://doi.org/10.6084/m9.figshare.14977281

  Data summary: SpliZ scores are available from figshare (https://doi.org/10.6084/m9.figshare.14977281).

• Publication

  released

  A human cell atlas of fetal gene expression

  Junyue Cao, Diana R O'Day, Hannah A Pliner, et al.

  Science. 2020-11-13;370(6518):eaba7721.

  • doi:10.1126/science.aba7721
  • PMID:33184181
  • PMCID:PMC7780123

  Available supplemental data: website

  File format: other format

  URL: https://descartes.brotmanbaty.org/bbi/human-chromatin-during-development/

  Data summary: sci-ATAC-seq data of human fetal tissues:…See more

• Publication

  released

  A human cell atlas of fetal chromatin accessibility

  Silvia Domcke, Andrew J Hill, Riza M Daza, et al.

  Science. 2020-11-13;370(6518):eaba7612.

  • doi:10.1126/science.aba7612
  • PMID:33184180
  • PMCID:PMC7785298

  Available supplemental data: website

  File format: other format

  URL: https://descartes.brotmanbaty.org/bbi/human-chromatin-during-development/

  Data summary: sci-ATAC-seq data of human fetal tissues:…See more

• Publication

  released

  The GTEx Consortium atlas of genetic regulatory effects across human tissues

  GTEx Consortium.

  Science. 2020-09-11;369(6509):1318-1330.

  • doi:10.1126/science.aaz1776
  • PMID:32913098
  • PMCID:PMC7737656

• Publication

  released

  Exploring genetic interaction manifolds constructed from rich single-cell phenotypes

  Thomas M Norman, Max A Horlbeck, Joseph M Replogle, et al.

  Science. 2019-08-23;365(6455):786-793.

  • doi:10.1126/science.aax4438
  • PMID:31395745
  • PMCID:PMC6746554

• Publication

  released

  Single-cell RNA-seq analysis reveals the progression of human osteoarthritis

  Quanbo Ji, Yuxuan Zheng, Guoqiang Zhang, et al.

  Ann Rheum Dis. 2018-07-19;78(1):100-110.

  • doi:10.1136/annrheumdis-2017-212863
  • PMID:30026257
  • PMCID:PMC6317448