Search – Common Metabolic Diseases Genome Atlas

Showing 9 of 9 results

Publication
released
The Tabula Sapiens: A multiple-organ, single-cell transcriptomic atlas of humans
Tabula Sapiens Consortium*; Robert C Jones, Jim Karkanias, Mark A Krasnow, et al.
Science. 2022-05-13;376(6594):eabl4896.
- doi:10.1126/science.abl4896
- PMID:35549404
Available supplemental data: website
URL: http://tabula-sapiens-portal.ds.czbiohub.org/
Data summary: The entire dataset can be explored interactively at http://tabula-sapiens-portal.ds.czbiohub.org/.
Available supplemental data: website
URL: https://doi.org/10.5281/zenodo.6069683
Data summary: The code used for the analysis is available from Zenodo (https://doi.org/10.5281/zenodo.6069683).
Available supplemental data: website
URL: https://doi.org/10.6084/m9.figshare.14267219
Data summary: Gene counts and metadata are available from figshare…
Available supplemental data: website
URL: https://registry.opendata.aws/tabula-sapiens/
Data summary: The raw data files are available from a public AWS S3 bucket…
Available supplemental data: website
URL: https://doi.org/10.6084/m9.figshare.14962947
Data summary: The histology images are available from figshare (https://doi.org/10.6084/m9.figshare.14962947).
Available supplemental data: website
URL: https://doi.org/10.6084/m9.figshare.14977281
Data summary: SpliZ scores are available from figshare (https://doi.org/10.6084/m9.figshare.14977281).
Publication
released
Integration of genomics and transcriptomics predicts diabetic retinopathy susceptibility genes
Andrew D Skol, Segun C Jung, Ana Marija Sokovic, et al.
eLife. 2020-11-09;:e59980.
URL: https://datadryad.org/stash/dataset/doi:10.5061/dryad.zkh18938j
Publication
released
Single-cell multiomic profiling of human lungs reveals cell-type-specific and age-dynamic control of SARS-CoV2 host genes
Allen Wang, Joshua Chiou, Olivier B Poirion, et al.
eLife. 2020-11-09;9:e62522.
- doi:10.7554/eLife.62522
- PMID:33164753
Available supplemental data: website
File format: other format
URL: https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs001961.v1.p1
Data summary: sci-ATAC-seq data of human lung samples: dbGaP: phs001961
Publication
released
CommonMind Consortium provides transcriptomic and epigenomic data for Schizophrenia and Bipolar Disorder
Gabriel E. Hoffman, Jaroslav Bendl, Georgios Voloudakis, et al.
Sci Data. 2019-09-24;6(1):180.
Publication
released
The single-cell transcriptomic landscape of early human diabetic nephropathy
Parker C Wilson, Haojia Wu, Yuhei Kirita, et al.
Proc Natl Acad Sci U S A. 2019-09-24;116(39):19619-19625.
Publication
released
Chromatin conformation remains stable upon extensive transcriptional changes driven by heat shock
Judhajeet Ray, Paul R Munn, Anniina Vihervaara, et al.
Proc Natl Acad Sci U S A. 2019-09-24;116(39):19431-19439.
Available supplemental data: website
Data summary: Hi-C. Human K562 and Drosophila S2 cells were subjected to HS or not (NHS) and cross-linked with…
Publication
released
A Compendium of Chromatin Contact Maps Reveals Spatially Active Regions in the Human Genome
Anthony D. Schmitt, Ming Hu, Inkyung Jung, et al.
Cell Reports. 2016-11-15;17(8):2042-2059.
- doi:10.1016/j.celrep.2016.10.061
- PMID:27851967
URL: https://www.cell.com/cell-reports/fulltext/S2211-1247(16)31481-4
Publication
released
CD8 + T Cells from Human Neonates Are Biased toward an Innate Immune Response
Ariel O Galindo-Albarrán, Oscar H López-Portales, Darely Y Gutiérrez-Reyna, et al.
Cell Rep. 2016-11-15;17(8):2151-2160.
- doi:10.1016/j.celrep.2016.10.056
- PMID:27851975
Publication
released
Transcriptional Landscape of Human Tissue Lymphocytes Unveils Uniqueness of Tumor-Infiltrating T Regulatory Cells
Marco De Simone, Alberto Arrigoni, Grazisa Rossetti, et al.
Immunity. 2016-11-15;45(5):1135-1147.

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Showing 9 of 9 results