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Showing 24 of 24 results
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Fan Zhang, Anna Helena Jonsson, Aparna Nathan, et al.
Nature. 2023-11-08;623(7987):616-624.
Data summary: CITE-seq single-cell expression matrices and sequencing and bulk expression matrices are available…Data summary: Associated genotype and clinical data are available through the Arthritis and Autoimmune and…Data summary: A cell browser website is available to visualize our data and results.Data summary: AMP Phase 1 single-cell data from ref. 8 are available on Immport (SDY998). PEAC clinical trial…Data summary: The source code for the analyses is available at GitHubData summary: The source code for the analyses is available at zenodoPublication
released
Ana Uzquiano, Amanda J Kedaigle, Martina Pigoni, et al.
Cell. 2022-09-29;185(20):3770-3788.e27.
Available supplemental data: websiteData summary: Read-level data from scRNA-seq, scATAC-seq, SHARE-seq, and Slide-seq data, supporting the findings…Available supplemental data: websiteData summary: The count-level data and meta-data have been deposited at the Single Cell Portal.Available supplemental data: websiteData summary: Supplemental data related to Figures 1, ,3,3, ,4,4, ,5,5, ,6,6, and and77 has been deposited…Available supplemental data: websiteData summary: Code used during data analysis is available at GitHub. d Any additional information required to…Available supplemental data: websiteData summary: Data from previous publications that was used in this study can be found at the Gene Expression…Publication
released
Nils Briel, Viktoria C. Ruf, Katrin Pratsch, et al.
Acta Neuropathol. 2022-08-17;144(4):615–635.
Available supplemental data: websiteData summary: All scripts for pre-processing and analyzing the snATAC-seq data from PSP/CBD frontal cortex and…Publication
released
Chongyuan Luo, Hanqing Liu, Fangming Xie, et al.
Cell Genom. 2022-03-09;2(3):100107.
Available supplemental data: websiteData summary: Raw and processed data included in this study were deposited to NCBI GEO/SRA with accession number…Available supplemental data: websiteData summary: snmCAT-seq generated from brain tissues can be visualized at…Available supplemental data: websiteData summary: snRNA-seq data is available for download from the Neuroscience Multi-omics Archive…Available supplemental data: websiteData summary: The code for SingleCellFusion is available from https://github.com/mukamel-lab/SingleCellFusion.Available supplemental data: websiteData summary: The code benchmarking computational integration methods are available from…Available supplemental data: websiteData summary: The code reproducing the over- and under-splitting analysis are available from…Available supplemental data: websiteData summary: A detailed bench protocol for snmCAT-seq and future updates to the method can be found at…Publication
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Benjamin H. Mullin, Jennifer Tickner, Kun Zhu, et al.
Genome Biology. 2020-03-26;20(1):80.
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Ruilin Tian, Mariam A Gachechiladze, Connor H Ludwig, et al.
Neuron. 2019-10-23;104(2):239-255.e12.
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Parker C Wilson, Haojia Wu, Yuhei Kirita, et al.
Proc Natl Acad Sci U S A. 2019-09-24;116(39):19619-19625.
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Thomas M Norman, Max A Horlbeck, Joseph M Replogle, et al.
Science. 2019-08-23;365(6455):786-793.
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Jason C Klein, Aidan Keith, Sarah J Rice, et al.
Nat Commun. 2019-06-04;10(1):2434.
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Adrian Veres, Aubrey L Faust, Henry L Bushnell, et al.
Nature. 2019-05-01;569(7756):368-373.
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Yongxu Zhao, Zhuanghui Feng, Yongxian Zhang, et al.
Cell Rep. 2019-01-22;26(4):884-892.e4.
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Cynthia A Kalita, Christopher D Brown, Andrew Freiman, et al.
Genome Res. 2018-09-25;28(11):1701-1708.
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Tahsin Stefan Barakat, Florian Halbritter, Man Zhang, et al.
Cell Stem Cell. 2018-08-02;23(2):276-288.e8.
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Quanbo Ji, Yuxuan Zheng, Guoqiang Zhang, et al.
Ann Rheum Dis. 2018-07-19;78(1):100-110.
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Cassandra N Spracklen, Jinxiu Shi, Swarooparani Vadlamudi, et al.
PLoS Genet. 2018-04-05;14(4):e1007275.
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Ina Kycia, Brooke N Wolford, Jeroen R Huyghe, et al.
Am J Hum Genet. 2018-04-05;102(4):620-635.
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Weiping Sun, Sihong Yao, Jielong Tang, et al.
PLoS One. 2018-01-31;13(1):e0192105.
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Sílvia Bonàs-Guarch, Marta Guindo-Martínez, Irene Miguel-Escalada, et al.
Nat Commun. 2018-01-22;9(1):321.
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Bong-Seok Jo, In-Uk Koh, Jae-Bum Bae, et al.
Data Brief. 2016-09-14;9:382-387.
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Zhuo Chen, Feng Miao, Andrew D Paterson, et al.
Proc Natl Acad Sci U S A. 2016-05-24;113(21):E3002-11.
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Jin Li, Johanna Klughammer, Matthias Farlik, et al.
EMBO Rep. 2016-02-17;17(2):178-87.
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Shimrat Mamrut, Nili Avidan, Elsebeth Staun-Ram, et al.
Epigenetics. 2015-10-09;10(10):943-57.
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Cynthia Khoo, Juxiang Yang, Samuel A Weinrott, et al.
Mol Endocrinol. 2012-03-01;26(3):521-33.
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Zachary Pappalardo, Deeksha Gambhir Chopra, Thomas G Hennings, et al.
Diabetes. 2017-02-28;66(6):1703-1712.