Summary for embeddings file set DSR692HQS
- Status: released
Summary
- Accession
- DSR692HQS
- Description
- Reference map of islet cell type-specific gene expression from 192,203 cells derived from single cell RNA-seq assays of 65 non-diabetic, T1D autoantibody positive (Aab+), T1D, and T2D donors from the Human Pancreas Analysis Program
- Biosample summary
- pancreas
- Biosample type
- tissue
- Organism
- human
- Type
- Gene expression
- Underlying Assay
- 10X scRNA-seq
- Category
- umap
- Source
- Seurat
- Pipeline
- /pipelines/DPL255HPT/
- Software used
- r4.1
Attribution
AMP Consortium
- Lab
- Kyle Gaulton, UCSD
- Award
- DK114650 (Kyle Gaulton, UCSD)
- Aliases
- kyle-gaulton:elgamal_embedding
- External resources
- None submitted
- Collection Tags
- T1D,T2D,AAB+
- Publications