Search – Common Metabolic Diseases Genome Atlas

Showing 25 of 65 results

FileSet
DSR308TXA
released
Annotation file set: Variant allelic effects annotation from MPRA to prioritize disease-associated variants for five autoimmune diseases.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR684XQS
released
Annotation file set: Variant allelic effects annotation for MPRA of the cis-regulatory effects of SNPs associated with T2D and altered in vivo islet chromatin accessibility in MIN6 cells under pathophysiologic endoplasmic reticulum (ER) stress conditions (thapsigargin treatment).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR646GMS
released
Annotation file set: Variant allelic effects annotation for MPRA of the cis-regulatory effects of SNPs associated with T2D and altered in vivo islet chromatin accessibility in MIN6 cells under steady state (baseline, DMSO)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR502WRJ
released
Annotation file set: histone quantitative trait loci (hQTL) from H3K4me1 ChIP-seq of BLUEPRINT epigenome project of human immune cell types (naive CD4+ T cells) from up to 197 individuals.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR804HBZ
released
Annotation file set: histone quantitative trait loci (hQTL) from H3K4me1 ChIP-seq of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR650UBZ
released
Annotation file set: histone quantitative trait loci (hQTL) from H3K4me1 ChIP-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR676ZHI
released
Annotation file set: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR930EID
released
Annotation file set: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR963XVP
released
Annotation file set: Variant allelic effects annotation of Vascular smooth muscle cells (sub-type2) from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR330XKZ
released
Annotation file set: Variant allelic effects annotation of T lymphocytes from snATAC (sub-type2) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR333IHE
released
Annotation file set: Variant allelic effects annotation of schwann cells from snATAC (sub-type2) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR475VRW
released
Annotation file set: Variant allelic effects annotation of Smooth muscle cells (sub-type2) from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR580SRP
released
Annotation file set: Variant allelic effects annotation of Myofibroblasts from snATAC (sub-type3) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR877EWI
released
Annotation file set: Variant allelic effects annotation of Myofibroblasts from snATAC (sub-type2) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR536CVD
released
Annotation file set: Variant allelic effects annotation of Macrophages from snATAC (sub-type3) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR334UBF
released
Annotation file set: Variant allelic effects annotation of Macrophages from snATAC (sub-type2) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR276IOG
released
Annotation file set: Variant allelic effects annotation of Goblet cells from snATAC (sub-type2) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR858APO
released
Annotation file set: Variant allelic effects annotation of Fibroblast from snATAC (sub-type6) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR382OHZ
released
Annotation file set: Variant allelic effects annotation of Fibroblast from snATAC (sub-type5) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR385UFW
released
Annotation file set: Variant allelic effects annotation of Fibroblast from snATAC (sub-type4) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR759CGN
released
Annotation file set: Variant allelic effects annotation of Fibroblast from snATAC (sub-type3) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR603PGC
released
Annotation file set: Variant allelic effects annotation of Fibroblast from snATAC (sub-type2) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR035TOY
released
Annotation file set: Variant allelic effects annotation of Endothelial cells (sub-type2) from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR972LVJ
released
Annotation file set: Variant allelic effects annotation of Enterocytes (sub-type3) from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR623GGP
released
Annotation file set: Variant allelic effects annotation of Enterocytes (sub-type2) from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP