Search – Common Metabolic Diseases Genome Atlas

Showing 25 of 142 results

FileSet
DSR308TXA
released
Annotation file set: Variant allelic effects annotation from MPRA to prioritize disease-associated variants for five autoimmune diseases.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR684XQS
released
Annotation file set: Variant allelic effects annotation for MPRA of the cis-regulatory effects of SNPs associated with T2D and altered in vivo islet chromatin accessibility in MIN6 cells under pathophysiologic endoplasmic reticulum (ER) stress conditions (thapsigargin treatment).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR646GMS
released
Annotation file set: Variant allelic effects annotation for MPRA of the cis-regulatory effects of SNPs associated with T2D and altered in vivo islet chromatin accessibility in MIN6 cells under steady state (baseline, DMSO)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR976GBT
released
Annotation file set: High-throughput analysis of the binding of human transcription factors to common sequence variants by SNP-SELEX (in-silico assay)
Lab: Kyle Gaulton, UCSD
Project: T1D
FileSet
DSR524ZAH
released
Annotation file set: pQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab: ITG
Project: ITG
FileSet
DSR651XSZ
released
Annotation file set: pQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab: ITG
Project: ITG
FileSet
DSR963XVP
released
Annotation file set: Variant allelic effects annotation of Vascular smooth muscle cells (sub-type2) from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR330XKZ
released
Annotation file set: Variant allelic effects annotation of T lymphocytes from snATAC (sub-type2) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR333IHE
released
Annotation file set: Variant allelic effects annotation of schwann cells from snATAC (sub-type2) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR475VRW
released
Annotation file set: Variant allelic effects annotation of Smooth muscle cells (sub-type2) from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR580SRP
released
Annotation file set: Variant allelic effects annotation of Myofibroblasts from snATAC (sub-type3) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR877EWI
released
Annotation file set: Variant allelic effects annotation of Myofibroblasts from snATAC (sub-type2) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR536CVD
released
Annotation file set: Variant allelic effects annotation of Macrophages from snATAC (sub-type3) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR334UBF
released
Annotation file set: Variant allelic effects annotation of Macrophages from snATAC (sub-type2) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR276IOG
released
Annotation file set: Variant allelic effects annotation of Goblet cells from snATAC (sub-type2) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR858APO
released
Annotation file set: Variant allelic effects annotation of Fibroblast from snATAC (sub-type6) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR382OHZ
released
Annotation file set: Variant allelic effects annotation of Fibroblast from snATAC (sub-type5) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR385UFW
released
Annotation file set: Variant allelic effects annotation of Fibroblast from snATAC (sub-type4) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR759CGN
released
Annotation file set: Variant allelic effects annotation of Fibroblast from snATAC (sub-type3) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR603PGC
released
Annotation file set: Variant allelic effects annotation of Fibroblast from snATAC (sub-type2) from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR035TOY
released
Annotation file set: Variant allelic effects annotation of Endothelial cells (sub-type2) from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR972LVJ
released
Annotation file set: Variant allelic effects annotation of Enterocytes (sub-type3) from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR623GGP
released
Annotation file set: Variant allelic effects annotation of Enterocytes (sub-type2) from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR545JGJ
released
Annotation file set: Variant allelic effects annotation of Esophageal epithelial cells (sub-type2) from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP
FileSet
DSR139AMB
released
Annotation file set: Variant allelic effects annotation of Basal cells (sub-type2) from snATAC from Bing Ren Lab
Lab: Bing Ren, UCSD
Project: AMP