Search – Common Metabolic Diseases Genome Atlas

Showing 5 of 5 results

FileSet
DSR308TXA
released
Annotation file set: Variant allelic effects annotation from MPRA to prioritize disease-associated variants for five autoimmune diseases.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR684XQS
released
Annotation file set: Variant allelic effects annotation for MPRA of the cis-regulatory effects of SNPs associated with T2D and altered in vivo islet chromatin accessibility in MIN6 cells under pathophysiologic endoplasmic reticulum (ER) stress conditions (thapsigargin treatment).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR646GMS
released
Annotation file set: Variant allelic effects annotation for MPRA of the cis-regulatory effects of SNPs associated with T2D and altered in vivo islet chromatin accessibility in MIN6 cells under steady state (baseline, DMSO)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR976GBT
released
Annotation file set: High-throughput analysis of the binding of human transcription factors to common sequence variants by SNP-SELEX (in-silico assay)
Lab: Kyle Gaulton, UCSD
Project: T1D
FileSet
DSR289COU
released
Annotation file set: Variant allelic effects of cerebellar cortex ENCODE DHSseq
Lab: AMP-T2D consortium
Project: AMP