Search – Common Metabolic Diseases Genome Atlas

Showing 9 of 9 results

FileSet
DSR291812
released
Embeddings file set: Single-nucleus chromatin accessibility profiles quantified at consensus peak summits, with UMAP embeddings generated using Scanpy. (150bp +/- of the consensus peak summit).
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR186384
released
Embeddings file set: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR547861
released
Embeddings file set: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR856740
released
Embeddings file set: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR940154
released
Embeddings file set: This snATACseq dataset is comprised of CAD patients and controls from STARNET.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR827MAZ
released
Embeddings file set: Reference map of islet cell type-specific chromatin accessibility from 97,659 cells derived from single cell ATAC-seq assays of 41 non-diabetic, T1D autoantibody positive (Aab+), T1D, and T2D donors from the Human Pancreas Analysis Program
Lab: Kyle Gaulton, UCSD
Project: AMP
FileSet
DSR384UWH
released
Embeddings file set: Clustering of snATAC-seq accessible chromatin profiles from 4,926 cells from human skeletal muscle tissue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR132DPW
released
Embeddings file set: Single-cell ATAC-Seq data from human atherosclerosis. The files contain cells from endarterectomy samples from three donors, yielding approximately 7000 cells total. snATAC-Seq libraries were generated using the 10x Genomics scATAC-Seq v1 kit.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR322WJB
released
Embeddings file set: Islet snATAC-seq from control samples
Lab: Kyle Gaulton, UCSD
Project: AMP