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Embeddings type
2
Gene expression
Embeddings Category
2
umap
Underlying Assay
1
10X scRNA-seq
Available data
1
h5ad
1
rds
File set status
2
released
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
islet of Langerhans
3
pancreas
2
peripheral blood mononuclear cell
1
heart
Tissue term
1
heart
1
pancreas
Organ
1
heart
1
pancreas
Date released
1
June, 2025
1
March, 2023
Software used
1
r
Lab
55
AMP-T2D consortium
2
Kyle Gaulton, UCSD
2
Stephen Parker, UMich
2
Xin Sun, UCSD
1
Bing Ren, UCSD
Project
2
AMP
RFA
1
AMP
1
AMP2
biosample_term_name!
islet of Langerhans
Showing 2 of 2 results
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FileSet
DSR445357
released
Embeddings file set
: Integrate object with UMAP and RNA counts for FNIH multiome, CAREHF multiome, DPT and HiC.
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR692HQS
released
Embeddings file set
: Reference map of islet cell type-specific gene expression from 192,203 cells derived from single cell RNA-seq assays of 65 non-diabetic, T1D autoantibody positive (Aab+), T1D, and T2D donors from the Human Pancreas Analysis Program
Lab:
Kyle Gaulton, UCSD
Project:
AMP