Search – Common Metabolic Diseases Genome Atlas

Showing 25 of 29 results

FileSet
DSR291812
released
Embeddings file set: Single-nucleus chromatin accessibility profiles quantified at consensus peak summits, with UMAP embeddings generated using Scanpy. (150bp +/- of the consensus peak summit).
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR144369
released
Embeddings file set: Single-nucleus RNA-seq gene expression profiles after ambient RNA correction, with UMAP embeddings generated using Scanpy.
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR662TAR
released
Embeddings file set: Single nucleus ATAC-seq data in human pancreatic islets for 15 donor
Lab: Franck Mauvais-Jarvis Lab
Project: community
FileSet
DSR867WVO
released
Embeddings file set: Single cell RNA-seq data in human pancreatic islets for 52 donors
Lab: Franck Mauvais-Jarvis Lab
Project: community
FileSet
DSR827MAZ
released
Embeddings file set: Reference map of islet cell type-specific chromatin accessibility from 97,659 cells derived from single cell ATAC-seq assays of 41 non-diabetic, T1D autoantibody positive (Aab+), T1D, and T2D donors from the Human Pancreas Analysis Program
Lab: Kyle Gaulton, UCSD
Project: AMP
FileSet
DSR772NPS
released
Embeddings file set: This single-cell dataset is comprised of Healthy Reference: biopsy samples from the Human Cell Atlas participants, CKD: biopsy samples from the KPMP Main Study protocol participants, and AKI: biopsy samples from the KPMP Main Study protocol participants.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR692HQS
released
Embeddings file set: Reference map of islet cell type-specific gene expression from 192,203 cells derived from single cell RNA-seq assays of 65 non-diabetic, T1D autoantibody positive (Aab+), T1D, and T2D donors from the Human Pancreas Analysis Program
Lab: Kyle Gaulton, UCSD
Project: AMP
FileSet
DSR239UEV
released
Embeddings file set: The human cell atlas of Trachea from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR397DQO
released
Embeddings file set: The human cell atlas of Spleen from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR843THS
released
Embeddings file set: The human cell atlas of Skin from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR181DNL
released
Embeddings file set: The human cell atlas of Salivary Gland from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR451YDC
released
Embeddings file set: The human cell atlas of Muscle from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR885FKV
released
Embeddings file set: The human cell atlas of Mammary Gland from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR687QWV
released
Embeddings file set: The human cell atlas of Lymph Node from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR956GXS
released
Embeddings file set: The human cell atlas of Liver from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR135DPE
released
Embeddings file set: The human cell atlas of Large Intestine from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR957UZP
released
Embeddings file set: The human cell atlas of Kidney from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR271MPP
released
Embeddings file set: The human cell atlas of Heart from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR877ZIP
released
Embeddings file set: The human cell atlas of Eye from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR363VWA
released
Embeddings file set: The human cell atlas of Bone Marrow from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR284DTT
released
Embeddings file set: The human cell atlas of Blood from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR982CZA
released
Embeddings file set: The human cell atlas of stromal cells from 24 organs of 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR678KMD
released
Embeddings file set: The human cell atlas of endothelial cells from 24 organs of 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR622GML
released
Embeddings file set: The human cell atlas of all cells from 24 organs of 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR384UWH
released
Embeddings file set: Clustering of snATAC-seq accessible chromatin profiles from 4,926 cells from human skeletal muscle tissue
Lab: AMP-T2D consortium
Project: AMP