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Citing CMDGA
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Embeddings type
2
Gene expression
1
Accessible chromatin
Embeddings Category
3
umap
Underlying Assay
2
10X scRNA-seq
1
10X snATAC-seq
1
Smart-seq
Available data
3
h5ad
File set status
3
released
Organism
3
Homo sapiens
Biosample type
3
tissue
1
primary cell
Biosample term
3
islet of Langerhans
3
pancreas
1
peripheral blood mononuclear cell
Tissue term
3
pancreas
1
blood
Organ
3
pancreas
1
blood
1
bodily fluid
Life stage
1
adult
Date released
1
August, 2021
1
March, 2023
1
May, 2022
Software used
1
r
Lab
2
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Project
2
AMP
1
T1D
RFA
2
AMP
1
T1D
tissue_term_name!
carotid canal
Showing 3 of 3 results
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FileSet
DSR692HQS
released
Embeddings file set
: Reference map of islet cell type-specific gene expression from 192,203 cells derived from single cell RNA-seq assays of 65 non-diabetic, T1D autoantibody positive (Aab+), T1D, and T2D donors from the Human Pancreas Analysis Program
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR612IYX
released
Embeddings file set
: The human cell atlas of Pancreas from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR047LET
released
Embeddings file set
: Clustering of accessible chromatin profiles from 131,554 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab:
Kyle Gaulton, UCSD
Project:
T1D