Showing 14 of 14 results

• Publication

  released

  Human skeletal muscle aging atlas

  Veronika R. Kedlian, Yaning Wang, Tianliang Liu, et al.

  Nature Aging. 2024-04-15;

  • PMID:38622407
  • doi:10.1038/s43587-024-00613-3

  URL: https://www.muscleageingcellatlas.org

  Data summary: The processed data objects generated within this study are available for browsing

  URL: https://doi.org/10.7272/Q65X273X

  Data summary: Raw sequencing data for the newly generated libraries have been deposited to ArrayExpress…See more

  Data summary: Mouse datasets were obtained from GSE110878, GSE138707, GSE134540, GSE143476, GSE149590 and…See more

  Data summary: All other data supporting the findings of this study are available from the corresponding authors…See more

  URL: https://github.com/Teichlab/SKM_ageing_atlas

  Data summary: Code availability: All custom notebooks and scripts used in this study have been deposited to

• Publication

  released

  Identification and Massively Parallel Characterization of Regulatory Elements Driving Neural Induction

  Fumitaka Inoue, Anat Kreimer, Tal Ashuach, et al.

  Cell Stem Cell. 2019-11-07;25(5):713-727.e10.

  • PMID:31631012
  • PMCID:PMC6850896
  • doi:10.1016/j.stem.2019.09.010

• Publication

  released

  The single-cell transcriptomic landscape of early human diabetic nephropathy

  Parker C Wilson, Haojia Wu, Yuhei Kirita, et al.

  Proc Natl Acad Sci U S A. 2019-09-24;116(39):19619-19625.

  • PMID:31506348
  • PMCID:PMC6765272
  • doi:10.1073/pnas.1908706116

• Publication

  released

  Chromatin conformation remains stable upon extensive transcriptional changes driven by heat shock

  Judhajeet Ray, Paul R Munn, Anniina Vihervaara, et al.

  Proc Natl Acad Sci U S A. 2019-09-24;116(39):19431-19439.

  • doi:10.1073/pnas.1901244116
  • PMID:31506350
  • PMCID:PMC6765289

  Available supplemental data: website

  Data summary: Hi-C. Human K562 and Drosophila S2 cells were subjected to HS or not (NHS) and cross-linked with…See more

• Publication

  released

  Multiomic Profiling Identifies cis-Regulatory Networks Underlying Human Pancreatic β Cell Identity and Function

  Nathan Lawlor, Eladio J. Márquez, Peter Orchard, et al.

  Cell Reports. 2019-01-15;26(3):788-801.e6.

  • doi:10.1016/j.celrep.2018.12.083
  • PMID:30650367

  URL: https://www.sciencedirect.com/science/article/pii/S2211124718320436?via%3Dihub

• Publication

  released

  The TFAP2C-Regulated OCT4 Naive Enhancer Is Involved in Human Germline Formation

  Di Chen, Wanlu Liu, Jill Zimmerman, et al.

  Cell Reports. 2018-12-26;25(13):3591-3602.e5.

  • doi:10.1016/j.celrep.2018.12.011
  • PMID:30590035

  URL: https://www.sciencedirect.com/science/article/pii/S2211124718319223?via%3Dihub

• Publication

  released

  Single-Cell Transcriptomic Analysis of Cardiac Differentiation from Human PSCs Reveals HOPX-Dependent Cardiomyocyte Maturation

  Clayton E Friedman, Quan Nguyen, Samuel W Lukowski, et al.

  Cell Stem Cell. 2018-10-04;23(4):586-598.e8.

  • doi:10.1016/j.stem.2018.09.009
  • PMID:30290179
  • PMCID:PMC6220122

• Publication

  released

  Functional Dissection of the Enhancer Repertoire in Human Embryonic Stem Cells

  Tahsin Stefan Barakat, Florian Halbritter, Man Zhang, et al.

  Cell Stem Cell. 2018-08-02;23(2):276-288.e8.

  • doi:10.1016/j.stem.2018.06.014
  • PMID:30033119
  • PMCID:PMC6084406

• Publication

  released

  Large, Diverse Population Cohorts of hiPSCs and Derived Hepatocyte-like Cells Reveal Functional Genetic Variation at Blood Lipid-Associated Loci

  Evanthia E Pashos, YoSon Park, Xiao Wang, et al.

  Cell Stem Cell. 2017-04-06;20(4):558-570.e10.

  • doi:10.1016/j.stem.2017.03.017
  • PMID:28388432
  • PMCID:PMC5476422

• Publication

  released

  A Compendium of Chromatin Contact Maps Reveals Spatially Active Regions in the Human Genome

  Anthony D. Schmitt, Ming Hu, Inkyung Jung, et al.

  Cell Reports. 2016-11-15;17(8):2042-2059.

  • doi:10.1016/j.celrep.2016.10.061
  • PMID:27851967

  URL: https://www.cell.com/cell-reports/fulltext/S2211-1247(16)31481-4

• Publication

  released

  Epigenomic profiling reveals an association between persistence of DNA methylation and metabolic memory in the DCCT/EDIC type 1 diabetes cohort

  Zhuo Chen, Feng Miao, Andrew D Paterson, et al.

  Proc Natl Acad Sci U S A. 2016-05-24;113(21):E3002-11.

  • doi:10.1073/pnas.1603712113
  • PMID:27162351
  • PMCID:PMC4890596

• Publication

  released

  Epigenetic Priming Of Enhancers Predicts Developmental Competence Of hESC-derived Endodermal Lineage Intermediates

  Allen Wang, Feng Yue, Yan Li, et al.

  Cell Stem Cell. 2015-04-02;16(4):386-399.

  • doi:10.1016/j.stem.2015.02.013
  • PMID:25842977

• Publication

  released

  Large-Scale Identification of Coregulated Enhancer Networks in the Adult Human Brain

  Marit W. Vermunt, Peter Reinink, Jeroen Korving, et al.

  Cell Reports. 2014-10-23;9(2):767-779.

  • doi:10.1016/j.celrep.2014.09.023
  • PMID:25373911

  URL: https://www.sciencedirect.com/science/article/pii/S221112471400802X?via%3Dihub

• Publication

  released

  Dynamic Chromatin Remodeling Mediated by Polycomb Proteins Orchestrates Pancreatic Differentiation of Human Embryonic Stem Cells

  Ruiyu Xie, Logan J. Everett, Hee-Woong Lim, et al.

  Cell Stem Cell. 2013-02-07;12(2):224-237.

  • doi:10.1016/j.stem.2012.11.023
  • PMID:23318056