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Embeddings type
1
Accessible chromatin
1
Gene expression
Embeddings Category
2
umap
Underlying Assay
1
10X scRNA-seq
1
10X snATAC-seq
1
Smart-seq
Available data
1
bed bed3
1
cloupe
1
h5ad
1
mtx
1
tbi
1
tsv
File set status
2
released
Genome assembly (visualization)
1
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
1
bone marrow
1
carotid canal
Tissue term
1
bone marrow
1
carotid canal
Organ
8
pancreas
6
musculature of body
5
connective tissue
4
adipose tissue
4
liver
4
vasculature
3
artery
3
blood
3
blood vessel
3
bodily fluid
3
lung
2
bone element
2
epithelium
2
heart
2
intestine
2
kidney
2
mouth
1
bone marrow
1
eye
1
large intestine
1
lymph node
1
mammary gland
1
prostate gland
1
skin of body
1
small intestine
1
spleen
1
thymus
1
tongue
1
trachea
1
uterus
Life stage
1
adult
Date released
2
May, 2022
Software used
1
cellranger-atac
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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FileSet
DSR363VWA
released
Embeddings file set
: The human cell atlas of Bone Marrow from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR132DPW
released
Embeddings file set
: Single-cell ATAC-Seq data from human atherosclerosis. The files contain cells from endarterectomy samples from three donors, yielding approximately 7000 cells total. snATAC-Seq libraries were generated using the 10x Genomics scATAC-Seq v1 kit.
Lab:
AMP-T2D consortium
Project:
AMP