Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Embeddings type
5
Gene expression
1
Accessible chromatin
Embeddings Category
6
umap
Underlying Assay
5
10X scRNA-seq
3
Smart-seq
1
10X snATAC-seq
Available data
6
h5ad
File set status
6
released
Organism
5
Homo sapiens
Biosample type
6
tissue
2
primary cell
Biosample term
4
islet of Langerhans
4
pancreas
3
heart
3
lung
2
kidney
2
peripheral blood mononuclear cell
2
skeletal muscle tissue
1
bladder organ
1
blood
1
bone marrow
1
carotid canal
1
cell
1
endothelial cell
1
epithelial cell
1
eye
1
fat pad
1
immune system
1
large intestine
1
liver
1
lymph node
1
major salivary gland
1
mammary gland
1
muscle organ
1
prostate gland
1
skin of body
1
small intestine
1
spleen
1
stromal cell
1
thymus
1
tissues
1
tongue
1
trachea
1
uterus
1
vasculature
Tissue term
4
pancreas
2
blood
1
liver
1
skin of body
Organ
4
pancreas
2
blood
2
bodily fluid
1
liver
1
skin of body
Life stage
3
adult
Date released
3
May, 2022
2
August, 2021
1
March, 2023
Software used
1
r
Lab
3
AMP-T2D consortium
3
Kyle Gaulton, UCSD
Project
4
AMP
2
T1D
RFA
4
AMP
2
T1D
Showing 6 of 6 results
table-tab-icon
matrix-icon
FileSet
DSR692HQS
released
Embeddings file set
: Reference map of islet cell type-specific gene expression from 192,203 cells derived from single cell RNA-seq assays of 65 non-diabetic, T1D autoantibody positive (Aab+), T1D, and T2D donors from the Human Pancreas Analysis Program
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR843THS
released
Embeddings file set
: The human cell atlas of Skin from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR612IYX
released
Embeddings file set
: The human cell atlas of Pancreas from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR956GXS
released
Embeddings file set
: The human cell atlas of Liver from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR675TJW
released
Embeddings file set
: Clustering of scRNA-seq profiles from 90,495 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR047LET
released
Embeddings file set
: Clustering of accessible chromatin profiles from 131,554 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab:
Kyle Gaulton, UCSD
Project:
T1D