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Citing CMDGA
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Embeddings type
2
Gene expression
1
Accessible chromatin
Embeddings Category
3
umap
Underlying Assay
1
10X scRNA-seq
1
10X snATAC-seq
1
10X snRNA-seq
Available data
3
h5ad
File set status
3
released
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
islet of Langerhans
3
pancreas
2
lung
2
peripheral blood mononuclear cell
Tissue term
2
lung
1
pancreas
Organ
2
lung
1
pancreas
Date released
2
September, 2021
1
March, 2023
Software used
1
r
Lab
AMP-T2D consortium
2
Xin Sun, UCSD
Bing Ren, UCSD
1
Kyle Gaulton, UCSD
Project
2
LungMap
1
AMP
RFA
2
LungMap2
1
AMP
lab.title!
Bing Ren, UCSD
AMP-T2D consortium
biosample_term_name!
islet of Langerhans
Showing 3 of 3 results
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FileSet
DSR692HQS
released
Embeddings file set
: Reference map of islet cell type-specific gene expression from 192,203 cells derived from single cell RNA-seq assays of 65 non-diabetic, T1D autoantibody positive (Aab+), T1D, and T2D donors from the Human Pancreas Analysis Program
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR514DTZ
released
Embeddings file set
: snRNA-seq on non-diseased lung tissue ~30-week-old gestational age, ~3-year-old and ~30-year-old
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR722OVR
released
Embeddings file set
: snATAC-seq on non-diseased lung tissue ~30-week-old gestational age, ~3-year-old and ~30-year-old
Lab:
Xin Sun, UCSD
Project:
LungMap