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Embeddings type
3
Gene expression
Embeddings Category
3
umap
Underlying Assay
2
10X snRNA-seq
1
10X scRNA-seq
Available data
3
h5ad
1
mtx
1
tsv
File set status
3
released
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
islet of Langerhans
3
pancreas
2
heart
2
lung
2
peripheral blood mononuclear cell
1
kidney
1
tissues
Tissue term
2
heart
1
pancreas
Organ
1
heart
1
pancreas
Life stage
1
adult
Date released
May, 2022
1
February, 2023
1
March, 2023
1
September, 2020
Software used
1
r
Lab
2
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
3
AMP
RFA
3
AMP
month_released!
May, 2022
biosample_term_name!
islet of Langerhans
Showing 3 of 3 results
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FileSet
DSR692HQS
released
Embeddings file set
: Reference map of islet cell type-specific gene expression from 192,203 cells derived from single cell RNA-seq assays of 65 non-diabetic, T1D autoantibody positive (Aab+), T1D, and T2D donors from the Human Pancreas Analysis Program
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR549TWY
released
Embeddings file set
: Using large-scale single nuclei RNA sequencing, defined the transcriptional and cellular diversity in the normal human heart.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR758NPF
released
Embeddings file set
: snRNA-seq embedding on nuclei isolated from cardiac chambers from four human donors without cardiovascular pathology
Lab:
AMP-T2D consortium
Project:
AMP