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Citing CMDGA
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Embeddings type
3
Accessible chromatin
3
Gene expression
Embeddings Category
3
umap
Underlying Assay
2
10X snRNA-seq
1
10X scRNA-seq
Available data
3
h5ad
1
mtx
1
tsv
File set status
3
released
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
2
pancreas
1
heart
islet of Langerhans
1
peripheral blood mononuclear cell
1
skeletal muscle tissue
Tissue term
1
heart
lung
1
pancreas
1
skeletal muscle tissue
Organ
1
musculature of body
1
pancreas
Life stage
adult
Date released
1
March, 2023
1
May, 2022
1
September, 2020
Software used
1
r
Lab
2
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
3
AMP
RFA
3
AMP
relevant_life_stage!
adult
biosample_term_name!
islet of Langerhans
tissue_term_name!
lung
Showing 3 of 3 results
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FileSet
DSR692HQS
released
Embeddings file set
: Reference map of islet cell type-specific gene expression from 192,203 cells derived from single cell RNA-seq assays of 65 non-diabetic, T1D autoantibody positive (Aab+), T1D, and T2D donors from the Human Pancreas Analysis Program
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR493VFJ
released
Embeddings file set
: Clustering of snRNA-seq gene expression profiles from 27,605 cells from human skeletal muscle tissue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR758NPF
released
Embeddings file set
: snRNA-seq embedding on nuclei isolated from cardiac chambers from four human donors without cardiovascular pathology
Lab:
AMP-T2D consortium
Project:
AMP