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Citing CMDGA
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Embeddings type
6
Accessible chromatin
4
Gene expression
Embeddings Category
4
umap
Underlying Assay
3
10X snRNA-seq
1
10X scRNA-seq
Available data
4
h5ad
1
mtx
1
tsv
File set status
4
released
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
1
heart
1
lung
1
pancreas
1
skeletal muscle tissue
Tissue term
1
heart
1
lung
1
pancreas
1
skeletal muscle tissue
Organ
1
lung
1
musculature of body
1
pancreas
Life stage
adult
Date released
August, 2021
1
March, 2023
1
May, 2022
1
September, 2020
1
September, 2021
Software used
1
r
Lab
2
AMP-T2D consortium
1
Kyle Gaulton, UCSD
1
Xin Sun, UCSD
Project
3
AMP
1
LungMap
RFA
3
AMP
1
LungMap2
relevant_life_stage!
adult
month_released!
August, 2021
Showing 4 of 4 results
table-tab-icon
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FileSet
DSR692HQS
released
Embeddings file set
: Reference map of islet cell type-specific gene expression from 192,203 cells derived from single cell RNA-seq assays of 65 non-diabetic, T1D autoantibody positive (Aab+), T1D, and T2D donors from the Human Pancreas Analysis Program
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR493VFJ
released
Embeddings file set
: Clustering of snRNA-seq gene expression profiles from 27,605 cells from human skeletal muscle tissue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR758NPF
released
Embeddings file set
: snRNA-seq embedding on nuclei isolated from cardiac chambers from four human donors without cardiovascular pathology
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR514DTZ
released
Embeddings file set
: snRNA-seq on non-diseased lung tissue ~30-week-old gestational age, ~3-year-old and ~30-year-old
Lab:
Xin Sun, UCSD
Project:
LungMap