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Schema
Citing CMDGA
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Embeddings type
4
Gene expression
1
Accessible chromatin
Embeddings Category
5
umap
Underlying Assay
4
10X scRNA-seq
4
Smart-seq
1
10X snATAC-seq
Available data
4
h5ad
1
bed bed3
1
cloupe
1
mtx
1
tbi
1
tsv
File set status
5
released
Genome assembly (visualization)
1
hg19
Organism
5
Homo sapiens
Biosample type
3
tissue
2
primary cell
Biosample term
1
bone marrow
1
carotid canal
1
endothelial cell
1
epithelial cell
1
tongue
Tissue term
1
bone marrow
1
carotid canal
1
endothelial cell
1
epithelial cell
1
tongue
Organ
6
pancreas
3
blood
3
bodily fluid
3
lung
3
musculature of body
2
bone element
2
connective tissue
2
epithelium
2
intestine
2
kidney
2
mouth
1
adipose tissue
1
bone marrow
1
eye
1
large intestine
1
liver
1
lymph node
1
mammary gland
1
prostate gland
1
skin of body
1
small intestine
1
spleen
1
thymus
1
tongue
1
trachea
1
uterus
1
vasculature
Life stage
4
adult
Date released
5
May, 2022
Software used
1
cellranger-atac
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
tissue_term_name!
heart
Showing 5 of 5 results
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FileSet
DSR882MYH
released
Embeddings file set
: The human cell atlas of Tongue from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR363VWA
released
Embeddings file set
: The human cell atlas of Bone Marrow from 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR678KMD
released
Embeddings file set
: The human cell atlas of endothelial cells from 24 organs of 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR988JIN
released
Embeddings file set
: The human cell atlas of epithelial cells from 24 organs of 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR132DPW
released
Embeddings file set
: Single-cell ATAC-Seq data from human atherosclerosis. The files contain cells from endarterectomy samples from three donors, yielding approximately 7000 cells total. snATAC-Seq libraries were generated using the 10x Genomics scATAC-Seq v1 kit.
Lab:
AMP-T2D consortium
Project:
AMP