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Assay category
7
Transcription
Assay
474
total RNA-seq
153
ChIP-seq
25
ATAC-seq
9
DNase-seq
6
WGBS
5
pCHi-C
4
single cell RNA-seq
3
small RNA-seq
2
Capture-C
1
Hi-C
1
RNA microarray
1
RRBS
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
7
GRCh38
7
hg19
Organism
7
Homo sapiens
Biosample type
5
primary cell
2
tissue
Organ
94
heart
76
pancreas
70
epithelium
65
kidney
9
lung
7
brain
7
connective tissue
6
blood vessel
6
vasculature
4
liver
3
adipose tissue
3
musculature of body
2
artery
Life stage
7
adult
Available data
7
bam
7
bigWig
7
tsv
3
fastq
Platform
2
Illumina HiSeq 2000
1
Illumina NextSeq 500
Run type
3
single-ended
Read length (nt)
2
43
1
75
Library insert size (nt)
2
>100
2
>200
Library made from
7
RNA
Date released
3
July, 2019
2
April, 2018
2
July, 2018
Lab
7
AMP-T2D consortium
Replication type
5
anisogenic
2
unreplicated
Showing 7 of 7 results
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Experiment
DSR322WAZ
released
small RNA-seq
of subcutaneous adipose tissue
Homo sapiens
subcutaneous adipose tissue female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR882SMA
released
small RNA-seq
of omental fat pad
Homo sapiens
omental fat pad male adult (37 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR483BAA
released
small RNA-seq
of mesenchymal stem cell of adipose
Homo sapiens
mesenchymal stem cell of adipose female adult (37 years) and female adult (42 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR692699
released
single cell RNA-seq
of pancreatic stellate cell
Homo sapiens
pancreatic stellate cell female adult (37 years) and female adult (55 years) and male adult (52 years) and male adult (57 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR505983
released
single cell RNA-seq
of pancreatic stellate cell
Homo sapiens
pancreatic stellate cell female adult (48 years) and male adult (22 years) and male adult (23 years) and male adult (25 years) and male adult (27 years) and male adult (43 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR537841
released
single cell RNA-seq
of pancreatic stellate cell
Homo sapiens
pancreatic stellate cell female adult (42 years) and female adult (55 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR663505
released
single cell RNA-seq
of pancreatic stellate cell
Homo sapiens
pancreatic stellate cell female adult (56 years) and male adult (22 years)
Lab:
AMP-T2D consortium
Project:
AMP