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Assay category
5
Transcription
Assay
705
ChIP-seq
663
total RNA-seq
48
ATAC-seq
14
DNase-seq
11
WGBS
8
pCHi-C
6
small RNA-seq
5
Hi-C
5
single cell RNA-seq
3
RRBS
2
Capture-C
2
STARR-seq
1
RNA microarray
1
whole genome sequencing assay
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
tissue
Organ
93
heart
74
pancreas
70
epithelium
64
kidney
9
lung
6
blood vessel
6
vasculature
4
connective tissue
3
brain
2
artery
1
liver
1
musculature of body
Life stage
5
adult
Available data
4
bam
4
bigWig
4
tsv
3
fastq
1
csv
Platform
2
Illumina HiSeq 2000
1
Illumina NextSeq 500
Run type
3
single-ended
Read length (nt)
2
43
1
75
Library insert size (nt)
2
>100
2
>200
Library made from
5
RNA
Date released
2
April, 2018
2
July, 2018
1
February, 2021
Lab
5
AMP-T2D consortium
Replication type
5
anisogenic
Showing 5 of 5 results
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Experiment
DSR373SNC
released
single cell RNA-seq
of liver
Homo sapiens
liver female adult (41 year) and male adult (21 year) and male adult (26 years) and male adult (44 years) and male adult (65 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR692699
released
single cell RNA-seq
of pancreatic stellate cell
Homo sapiens
pancreatic stellate cell female adult (37 years) and female adult (55 years) and male adult (52 years) and male adult (57 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR505983
released
single cell RNA-seq
of pancreatic stellate cell
Homo sapiens
pancreatic stellate cell female adult (48 years) and male adult (22 years) and male adult (23 years) and male adult (25 years) and male adult (27 years) and male adult (43 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR537841
released
single cell RNA-seq
of pancreatic stellate cell
Homo sapiens
pancreatic stellate cell female adult (42 years) and female adult (55 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR663505
released
single cell RNA-seq
of pancreatic stellate cell
Homo sapiens
pancreatic stellate cell female adult (56 years) and male adult (22 years)
Lab:
AMP-T2D consortium
Project:
AMP