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Assay
RNA-seq
ChIP-seq
2
ATAC-seq
2
DNase-seq
2
single cell isolation followed by RNA-seq
1
whole genome sequencing assay
Pipeline status
5
active
Pipeline groups
1
ATAC-seq Pipeline Cebola Lab (Hepatocytes)
1
Annotation pipeline popularVote (popV for short) from Tabula Sapiens
1
Pipeline holder for unknown or undefined pipeline
1
Pseudo-bulk gene expression and differential activity (Elgamal et al.)
1
scRNA-seq clustering for HPAP dataset
Developed by
2
AMP-T2D consortium
2
Kyle Gaulton, UCSD
1
Ines Cebola, Imperial College London
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Picard
assay_term_names!
ChIP-seq
RNA-seq
Showing 5 of 5 results
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Pipeline
DPL255HPT
active
scRNA-seq clustering for HPAP dataset
Pipeline
DPL066WNI
active
Pseudo-bulk gene expression and differential activity (Elgamal et al.)
Assays:
single cell isolation followed by RNA-seq
Pipeline
DPL472KCS
active
Annotation pipeline popularVote (popV for short) from Tabula Sapiens
Assays:
single cell isolation followed by RNA-seq
Pipeline
DPL126DIZ
active
Pipeline holder for unknown or undefined pipeline
Pipeline
DPL779IGH
active
ATAC-seq Pipeline Cebola Lab (Hepatocytes)
Assays:
ATAC-seq
Software: