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Citing CMDGA
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Assay
ATAC-seq
4
ChIP-seq
2
DNase-seq
2
single cell isolation followed by RNA-seq
1
RNA-seq
1
whole genome sequencing assay
Pipeline status
8
active
Pipeline groups
1
A short overview of the main analysis steps for eQTL Catalogue
1
Annotation pipeline popularVote (popV for short) from Tabula Sapiens
1
ChIP-Atlas Pipeline
1
ChIP-seq Pipeline Cebola Lab
1
ChIP-seq Pipeline Ellinor Lab
1
Pipeline holder for unknown or undefined pipeline
1
Pseudo-bulk gene expression and differential activity (Elgamal et al.)
1
scRNA-seq clustering for HPAP dataset
Developed by
4
AMP-T2D consortium
2
Kyle Gaulton, UCSD
1
Ines Cebola, Imperial College London
1
Patrick T. Ellinor, Broad
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STAR
assay_term_names!
ATAC-seq
Showing 8 of 8 results
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Pipeline
DPL255HPT
active
scRNA-seq clustering for HPAP dataset
Pipeline
DPL066WNI
active
Pseudo-bulk gene expression and differential activity (Elgamal et al.)
Assays:
single cell isolation followed by RNA-seq
Pipeline
DPL472KCS
active
Annotation pipeline popularVote (popV for short) from Tabula Sapiens
Assays:
single cell isolation followed by RNA-seq
Pipeline
DPL126DIZ
active
Pipeline holder for unknown or undefined pipeline
Pipeline
DPL005RCG
active
A short overview of the main analysis steps for eQTL Catalogue
Assays:
RNA-seq, whole genome sequencing assay
Software:
Pipeline
DPL118KGX
active
ChIP-seq Pipeline Ellinor Lab
Assays:
ChIP-seq
Software:
Pipeline
DPL245EPK
active
ChIP-seq Pipeline Cebola Lab
Assays:
ChIP-seq
Software:
Pipeline
DPL983WYV
active
ChIP-Atlas Pipeline
Assays:
ChIP-seq, DNase-seq
Software: