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Assay
RNA-seq
4
ChIP-seq
3
ATAC-seq
2
DNase-seq
1
single cell isolation followed by RNA-seq
1
whole genome sequencing assay
Pipeline status
8
active
Pipeline groups
1
ATAC-seq Pipeline Cebola Lab
1
ATAC-seq Pipeline Cebola Lab (Hepatocytes)
1
Activity by Contact
1
Annotation pipeline popularVote (popV for short) from Tabula Sapiens
1
ChIP-Atlas Pipeline
1
ChIP-seq Pipeline Cebola Lab
1
ChIP-seq Pipeline Ellinor Lab
1
Pipeline holder for unknown or undefined pipeline
Developed by
4
AMP-T2D consortium
Kyle Gaulton, UCSD
3
Ines Cebola, Imperial College London
1
Patrick T. Ellinor, Broad
assay_term_names!
RNA-seq
analysis_steps.versions.software_versions.software.title!
bedToBigBed
lab.title!
Kyle Gaulton, UCSD
Showing 8 of 8 results
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Pipeline
DPL472KCS
active
Annotation pipeline popularVote (popV for short) from Tabula Sapiens
Assays:
single cell isolation followed by RNA-seq
Pipeline
DPL126DIZ
active
Pipeline holder for unknown or undefined pipeline
Pipeline
DPL779IGH
active
ATAC-seq Pipeline Cebola Lab (Hepatocytes)
Assays:
ATAC-seq
Software:
Pipeline
DPL741HGX
active
ATAC-seq Pipeline Cebola Lab
Assays:
ATAC-seq
Software:
Pipeline
DPL118KGX
active
ChIP-seq Pipeline Ellinor Lab
Assays:
ChIP-seq
Software:
Pipeline
DPL245EPK
active
ChIP-seq Pipeline Cebola Lab
Assays:
ChIP-seq
Software:
Pipeline
DPL983WYV
active
ChIP-Atlas Pipeline
Assays:
ChIP-seq, DNase-seq
Software:
Pipeline
DPL010CNP
active
Activity by Contact
Assays:
ATAC-seq, ChIP-seq, DNase-seq
Software: