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Citing CMDGA
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Assay
7
ChIP-seq
6
RNA-seq
4
ATAC-seq
4
Mint-ChIP-seq
2
DNase-seq
2
single cell isolation followed by RNA-seq
1
whole genome sequencing assay
Pipeline status
7
active
Pipeline groups
1
ChIP-Atlas Pipeline
1
ChIP-seq Pipeline (ENCODE)
1
ChIP-seq Pipeline Ellinor Lab
1
Histone ChIP-seq Pipeline 2 (ENCODE replicated)
1
Histone ChIP-seq Pipeline 2 (ENCODE unreplicated)
1
TF ChIP-seq Pipeline 2 (ENCODE replicated)
1
TF ChIP-seq Pipeline 2 (ENCODE unreplicated)
Developed by
6
AMP-T2D consortium
Ines Cebola, Imperial College London
1
Patrick T. Ellinor, Broad
lab.title!
Ines Cebola, Imperial College London
analysis_steps.versions.software_versions.software.title!
makeCandidateRegions.py
Showing 7 of 7 results
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Pipeline
DPL608JFY
active
TF ChIP-seq Pipeline 2 (ENCODE unreplicated)
Assays:
ChIP-seq, Mint-ChIP-seq
Software:
Pipeline
DPL935TZE
active
TF ChIP-seq Pipeline 2 (ENCODE replicated)
Assays:
ChIP-seq, Mint-ChIP-seq
Software:
Pipeline
DPL721SCW
active
Histone ChIP-seq Pipeline 2 (ENCODE unreplicated)
Assays:
ChIP-seq, Mint-ChIP-seq
Software:
Pipeline
DPL064PJG
active
Histone ChIP-seq Pipeline 2 (ENCODE replicated)
Assays:
ChIP-seq, Mint-ChIP-seq
Software:
Pipeline
DPL118KGX
active
ChIP-seq Pipeline Ellinor Lab
Assays:
ChIP-seq
Software:
Pipeline
DPL403RWM
active
ChIP-seq Pipeline (ENCODE)
Assays:
ChIP-seq
Software:
Pipeline
DPL983WYV
active
ChIP-Atlas Pipeline
Assays:
ChIP-seq, DNase-seq
Software: