Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema
Clear Filters
Assay category
  • 38Transcription
  • 22DNA accessibility
Assay
  • 36single cell RNA-seq
  • 18ATAC-seq
  • 4DNase-seq
  • 2total RNA-seq
Project
  • 50AMP
  • 10HPAP
RFA
  • 50AMP
  • 10HPAP
Experiment status
  • 60released
Genome assembly (visualization)
  • 60GRCh38
  • 50hg19
Organism
  • 60Homo sapiens
Biosample type
  • 48primary cell
  • 12tissue
Organ
  • 50pancreas
  • 42epithelium
  • 2connective tissue
  • 1adipose tissue
  • 1brain
  • 1spleen
Life stage
  • 46adult
  • 7child
  • 7newborn
  • 6unknown
  • 1embryonic
Available data
  • 60bigWig
  • 60fastq
  • 50bam
  • 38tsv
  • 12bed narrowPeak
  • 12bigBed narrowPeak
  • 4bed bed3+
  • 4bed broadPeak
  • 4bigBed broadPeak
Platform
  • 562Illumina HiSeq 2000
  • 218Illumina NovaSeq 6000
  • 188Illumina HiSeq 2500
  • 152Illumina HiSeq 4000
  • 140Illumina Genome Analyzer IIx
  • 106Illumina Genome Analyzer
  • 60Illumina NextSeq 500
  • 38HiSeq HighOutput V4
  • 26Illumina Genome Analyzer II
  • 16Illumina Genome Analyzer IIe
  • 8HiSeq 1500
  • 7MiSeq
  • 5Illumina HiSeq X Ten
  • 3Illumina Genome Analyzer I
  • 2Applied Biosystems SOLiD System 3 Plus
Run type
  • 39paired-ended