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Assay
5
RNA-seq
1
ChIP-seq
1
DNase-seq
1
whole genome sequencing assay
Pipeline status
6
active
Pipeline groups
1
A short overview of the main analysis steps for eQTL Catalogue
1
ChIP-Atlas Pipeline
1
RNA-seq Pipeline (Paired-ended, ENCODE)
1
RNA-seq Pipeline (Single-ended, ENCODE)
1
RNA-seq Pipeline 2 (Paired-ended, ENCODE)
1
RNA-seq Pipeline 2 (Single-ended, ENCODE)
Developed by
6
AMP-T2D consortium
3
Ines Cebola, Imperial College London
Showing 6 of 6 results
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Pipeline
DPL005RCG
active
A short overview of the main analysis steps for eQTL Catalogue
Assays:
RNA-seq, whole genome sequencing assay
Software:
Pipeline
DPL269LNG
active
RNA-seq Pipeline 2 (Single-ended, ENCODE)
Assays:
RNA-seq
Software:
Pipeline
DPL009OFN
active
RNA-seq Pipeline 2 (Paired-ended, ENCODE)
Assays:
RNA-seq
Software:
Pipeline
DPL610SXT
active
RNA-seq Pipeline (Paired-ended, ENCODE)
Assays:
RNA-seq
Software:
Pipeline
DPL610SXTsingleended
active
RNA-seq Pipeline (Single-ended, ENCODE)
Assays:
RNA-seq
Software:
Pipeline
DPL983WYV
active
ChIP-Atlas Pipeline
Assays:
ChIP-seq, DNase-seq
Software: