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Assay
9
ChIP-seq
7
ATAC-seq
7
RNA-seq
4
Mint-ChIP-seq
3
DNase-seq
2
single cell isolation followed by RNA-seq
1
whole genome sequencing assay
Pipeline status
7
active
Pipeline groups
1
A short overview of the main analysis steps for eQTL Catalogue
1
RNA-seq Pipeline (Paired-ended, ENCODE)
1
RNA-seq Pipeline (Single-ended, ENCODE)
1
RNA-seq Pipeline 2 (Paired-ended, ENCODE)
1
RNA-seq Pipeline 2 (Single-ended, ENCODE)
1
RNA-seq Pipeline Cebola Lab
1
RNA-seq Pipeline PLoS Genet. 2021-05-13;17(5):e100953
Developed by
5
AMP-T2D consortium
1
Ines Cebola, Imperial College London
1
Kyle Gaulton, UCSD
Showing 7 of 7 results
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Pipeline
DPL005RCG
active
A short overview of the main analysis steps for eQTL Catalogue
Assays:
RNA-seq, whole genome sequencing assay
Software:
Pipeline
DPL269LNG
active
RNA-seq Pipeline 2 (Single-ended, ENCODE)
Assays:
RNA-seq
Software:
Pipeline
DPL009OFN
active
RNA-seq Pipeline 2 (Paired-ended, ENCODE)
Assays:
RNA-seq
Software:
Pipeline
DPL172PKH
active
RNA-seq Pipeline PLoS Genet. 2021-05-13;17(5):e100953
Assays:
RNA-seq
Software:
Pipeline
DPL450NWL
active
RNA-seq Pipeline Cebola Lab
Assays:
RNA-seq
Software:
Pipeline
DPL610SXT
active
RNA-seq Pipeline (Paired-ended, ENCODE)
Assays:
RNA-seq
Software:
Pipeline
DPL610SXTsingleended
active
RNA-seq Pipeline (Single-ended, ENCODE)
Assays:
RNA-seq
Software: